Results for PDB structure: 3J5Q (with probe radius: 0.00Å)
Parameters used:
* Inside Points for TM-pore computation: 1
* Outside Points for TM-pore computation: 1
* Transmembrane Classification: TMHMM

Comment: The functionally significant channel we are interested in this structure was automatically found by extracting channels between top ranked boundary points inside and outside the membrane. Without using trans-membrane classification data, it is hard to find the same pore.

How to view: Select the only row pore in "Trans-membrane Pores" to view this pore.

Click on any table row below to view the corresponding channel.
Trans-membrane Pores
RankOut PtIn PtLengthBottle-neckStraightnessScore
Channel view in JMol
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Channel properties


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